The Boveri–Sutton chromosome theory states that the chromosomes are the basis of all genetic inheritance. Morgan's work with fruit flies provides a solid evidence associating a specific gene with a specific chromosome. SRY gene is important in the sex determination of humans. It encodes a SRY Protein which is responsible for male sex determination initiation. Certain human genetic disorders are sex-linked such as colorblindness and hemophilia. There are two exceptions to the chromosome theory of inheritance.


Image: “Chromosomes” by Zappys Technology Solutions. License: CC BY 2.0

Chromosome Theory of Inheritance


Image: “Graphic decomposition of a chromosome (found in the cell nucleus), to the bases pair of the DNA” by KES47. License: CC BY 3.0

Also known as the Boveri–Sutton chromosome theory, the chromosome theory of inheritance states that chromosomes are the basis of all genetic inheritance. It explains how genes are inherited in accordance with Mendel’s law. Each gene is located on a particular location, known as loci, on specific chromosomes. It is the behavior of chromosomes during meiosis that explains why genes inherit in accordance with Mendel’s law. During meiosis, chromosomes undergo two things:

  1. Segregation
  2. Independent assortment.

Linking Genes and Chromosomes on the basis of Morgan’s Work with Fruit Flies


Image: “Results from reciprocal crosses between red-eyed (Red) and white-eyed (White) Drosophila in Morgan’s experiments. w + = red allele (wild-type allele) and w = white (mutant allele). In sex-linked inheritance, alleles on sex chromosomes (XY) are inherited in predictable patterns. Drosophila sex-chromosomes.” by YassineMrabet. License: CC BY-SA 3.0

Morgan’s experiment with the fruit flies is a verification of chromosome theory. A mutation in the gene coding for the color of the eye in fruit fly causes the white color of the eye, instead of normal red color.

The eye color gene in fruit flies is located on the X chromosome.

During his experiment, Morgan found that when a red eyed female (wild-type) crosses with a white eyed male, all offspring (F1) are red-eyed. When F1 flies are crossed with each other, all the F2 females are red-eyed, and half of the F2 males are white eyed. This indicates that white eye color gene inherits in the pattern of X chromosome and is recessive. Whereas, red eye color is a dominant trait.

Sex Determination in Humans

All offspring inherit one X chromosome from the mother. Therefore, sex of a human being always is dependent on the type of sex chromosome they receive from the father. If it is a Y, the gender is a male, and if it is an X, the gender is a female.

SRY gene is important in the sex determination. It encodes an SRY Protein which is responsible for male sex determination initiation.

Y chromosome results in testes formation. If Y chromosome is absent, gonads would differentiate into ovaries.

Difference in Different Species




Humans, Drosophila












Sex-Linked Human Genetic Disorders

Human genetic disorders can be sex-linked.


It is more prevalent in males compared to females because it is an X-linked recessive trait.

A cross between a carrier female and affected female will result in the following:

  • 25 % affected sons
  • 25 % affected daughters
  • 25 % carrier daughter
  • 25 % normal sons

A cross between an affected mother and normal father would result in

  • 50 % affected sons
  • 50 % carrier daughters


It is an X-linked recessive disease in which the body’s ability to make blood clots is impaired. It results in prolonged bleeding after an injury and easy bruising of the skin.

Since females have two X chromosomes, they do not suffer unless both chromosomes carry the mutation.

A cross between an affected father and carrier female would result in

  • 25 % affected sons
  • 25 % carrier daughters
  • 25 % affected daughters
  • 25 % normal sons

A cross between an affected mother and normal father would result in

  • 50 % affected sons
  • 50 % carrier daughters

Amelogenesis imperfect (AI)

It is a dental disorder in which there is a defect in the enamel formation. Resultantly, the teeth are small, discolored, pitted, and easily worn. AI is an X-linked dominant trait.

A cross between an affected female and unaffected male will result in

  • 25 % affected sons
  • 25 % normal daughters
  • 25 % affected daughters
  • 25 % normal sons

A cross between an unaffected female and affected male will result in

  • 50 % affected daughters
  • 50 % normal sons


One of the X chromosomes gets inactive in female mammals through the process of X-inactivation. Men possess only one copy of X chromosome, so this phenomenon actually prevents females from having double X chromosome gene products. The choice of X chromosome selected for silencing is random, and once this X chromosome is inactive, it remains so for the rest of the life on an organism. The inactivated chromosome has heterochromatin, a transcriptionally inactive structure, and becomes a bar body.


Image: “A calico cat has different colored fur on various patches.” by dmgreen44. License: CC0 1.0

Tortoiseshell and Calico cats have a different color on their fur. This is a manifestation of X-inactivation. In these cats, the back and orange alleles which express fur color are located on X chromosomes. Orange and black fur have pigment, and white fur has no pigment in cats.

In an area where the fur is black, the allele for orange fur is inactive.

On the patch where fur is orange, the allele for black fur is inactive.

White fur, on the other hand, has no pigment.

Exceptions to chromosomal theory

There are two exceptions to this theory.

Organelle inheritance

Traits that are controlled by the genes outside the nucleus come under organelle inheritance. The genes expressing these traits are called extra-nuclear or cytoplasmic genes.

It is uniparental inheritance. Mitochondria in zygote from egg cell does not come from sperm during fertilization. The expression of those genes contained in this mitochondria is therefore exclusive to maternal inheritance. Similarly, in plants, chloroplast is often inherited from the mother.

Genomic imprinting

It is a genetic phenomenon in which only the non-imprinted allele from any one of the parent is expressed. The imprinted allele is silenced during the process, preventing it from expressing itself.

For example, a mouse inherits mutated recessive allele from the father and normally dominant allele from the mother. However, the mouse grows to express the mutated gene. It is because the normal dominant allele was silenced during genomic imprinting.

Epigenetic factors

These factors influence gene expressions. Specific changes in the following epigenetic factors can cause the genes to express differently in the form of certain diseases:

  • DNA packing
  • DNA methylation
  • Dietary impacts
  • Environmental impacts
  • Transposable elements
  • Regulatory genes
  • Individual lifestyle

Epigenetic changes can cause a host of disorders. Following are the examples of such disorders:

  • Cancers
  • Mental retardation associated disorders
  • Immune disorders
  • Pediatric disorders
  • Neuropsychiatric disorders
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