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Haloalkanes — Nucleophilic Substitution, SN2 & SN1 and Elimination Reaction

Organohalides are organic compounds containing one or more halogen substituent. There are about 5,000 organohalides occurring naturally, some of which are produced and are found in algae Algae Cell Types: Eukaryotic versus Prokaryotic and various marine organism. Organohalides are a big family of a compound wherein the halogen can be attached to an alkynyl group (C=C-X), a vinylic group (CC-X), a vinylic group (C=C-X), an aromatic ring (Ar-X), or an alkyl group (C-C-X). This article will focus Focus Area of enhancement measuring < 5 mm in diameter Imaging of the Breast specifically on haloalkanes.

Last updated: Mar 7, 2022

Editorial responsibility: Stanley Oiseth, Lindsay Jones, Evelin Maza

Haloalkane: Introduction

Haloalkane, also called alkyl halides, are the organic compound where the halogen is attached to an alkyl group. Haloalkanes may vary depending on the halide group attached, and/or the number of halide substituents. The size of a halogen group increases as you go down the periodic table because of having larger atomic radii. Because of this, the C-X bond strength decreases as you go down the periodic table. Later on, in this article, you will see the effect of this in terms of the reactivity of the alkyl halide. Alkyl halides may also vary depending on the extent of substitution. Compounds can be monosubstituted, disubstituted and much more.

One factor affecting the reactivities of haloalkane is bond polarity. Bond polarity arises from the differences in the electronegativities of atoms forming the bond. The higher the difference in their electronegativity values, the more polar is the bond. Halogens are more electronegative than carbon; that is why in alkyl halides, the C-X bond has the partially negative end in the X atom and the partially positive end in the C atom.

Nomenclature: Halo- …ane

Examples of haloalkanes

Examples of haloalkanes

Image by Lecturio.

Nucleophilic Substitution

Nucleophilic substitution reaction was first observed by the German chemist, Paul Walden, in 1896. He was able to observe that (+) and (-) malic acid can be interconverted using PCl5 and Ag2O. In general, a nucleophilic substitution reaction involves the substitution of one nucleophile by another. The general formula for this reaction is as follows:

R-X + Nu → R-Nu + X

Depending on the molecularity of the reaction, nucleophilic substitution reactions may be classified as SN1 or SN2. Depending on the reaction parameters and conditions, either SN1 or SN2 reactions may occur.

SN2 Reaction

The SN2 reaction is a nucleophilic substitution reaction wherein the reaction kinetics is dependent on the concentrations of the nucleophile and the alkyl halide. Reactions occur in a single step without the formation of any intermediate. The basic mechanism for the reaction involves an attack of the nucleophile on the opposite side of the leaving group. Bond formation and bond breakage occur at the same time.

The whole process involves inversion in the stereochemistry of the carbon involved in the reaction. Let us consider the reaction of the hydroxide ion with 2-bromobutane.

Sn2 reaction of 2-bromobutane and hydroxide ion

SN2 reaction of 2-bromobutane and hydroxide ion

Image by Mark Xavier Bailon.

Factors affecting SN2 reactions

Steric effect

One important variable Variable Variables represent information about something that can change. The design of the measurement scales, or of the methods for obtaining information, will determine the data gathered and the characteristics of that data. As a result, a variable can be qualitative or quantitative, and may be further classified into subgroups. Types of Variables in an SN2 reaction is the structure of the substrate Substrate A substance upon which the enzyme acts. Basics of Enzymes; this is because of the mechanism of the reaction which involves the formation of the pentavalent transition state Transition state The transition state represents the most unstable point of interactions between the enzyme and the substrate(s) and is the highest energy point of the reaction. Enzyme Kinetics. The presence of a bulky group in the structure of the substrate Substrate A substance upon which the enzyme acts. Basics of Enzymes prevents the fast approach of the nucleophile to the carbon where the leaving group is attached. The bulkier the group, the slower the reaction will be because of the apparent shielding of the target carbon against nucleophilic substitution.

Nucleophile

The nature of the nucleophile greatly affects how the SN2 reaction proceeds. Lewis bases Bases Usually a hydroxide of lithium, sodium, potassium, rubidium or cesium, but also the carbonates of these metals, ammonia, and the amines. Acid-Base Balance, neutral or uncharged, can serve as the nucleophile by donating an unshared pair of electrons. Different types of nucleophiles result in different relative rates of a reaction. In general, the more basic the nucleophile, the faster will be the reaction as the nucleophile is more willing to donate a pair of electrons. Within a column in the periodic table, nucleophilicity increases from top to bottom. This is because the electrons are less tightly held as the atom becomes larger. The charge in the nucleophile greatly affects the reaction rates as localized charges are more attracted towards nucleophilic substitution reactions than ordinary lone pairs of electrons.

Leaving group

Another factor affecting the SN2 reaction is the nature of the leaving group. Because the reaction involves the expulsion of the leaving group, with the group eventually bearing a negative charge, the best leaving group will be the ones that can best stabilize a negative charge in the transition state Transition state The transition state represents the most unstable point of interactions between the enzyme and the substrate(s) and is the highest energy point of the reaction. Enzyme Kinetics. If the leaving group can stabilize the negative charge well, the lower the energy requirement will be involved in the transition state Transition state The transition state represents the most unstable point of interactions between the enzyme and the substrate(s) and is the highest energy point of the reaction. Enzyme Kinetics and the more rapid the reaction will be. Weak bases Bases Usually a hydroxide of lithium, sodium, potassium, rubidium or cesium, but also the carbonates of these metals, ammonia, and the amines. Acid-Base Balance as the leaving group produce faster reactions.

Solvent

Rates of SN2 reactions are strongly affected by the solvent. Polar protic solvents, like water and methanol Methanol A colorless, flammable liquid used in the manufacture of formaldehyde and acetic acid, in chemical synthesis, antifreeze, and as a solvent. Ingestion of methanol is toxic and may cause blindness. Metabolic Acidosis, are not usually used for SN2 reactions as a formation of hydrogen bond inhibits the immediate attack of the nucleophile to the target carbon. Polar aprotic solvents, like acetonitrile, are able to raise the ground-state energy of the nucleophile by solvating metal cations Cations Positively charged atoms, radicals or groups of atoms which travel to the cathode or negative pole during electrolysis. Electrolytes resulting to greater nucleophilicity of the anions Anions Negatively charged atoms, radicals or groups of atoms which travel to the anode or positive pole during electrolysis. Electrolytes.

SN1 Reaction

This is a type of nucleophilic substitution reaction where the reaction is unimolecular; that is the reaction only depends on the concentration of the alkyl halide. Unlike in SN2 where the reaction is in 1 step, the SN1 reaction proceeds in 2 steps and involves the formation of a carbocation intermediate. The first step of the reaction involves the spontaneous generation of a carbocation intermediate and the leaving group with a negative charge. The nucleophile then interacts with the carbocation forming the final substituted product Product A molecule created by the enzymatic reaction. Basics of Enzymes.

As an example, consider the reaction of (CH3)3CBr and water. As expected, this reaction will not proceed readily in an SN2 mechanism as there are a lot of bulky groups that inhibit the formation of the pentavalent transition state Transition state The transition state represents the most unstable point of interactions between the enzyme and the substrate(s) and is the highest energy point of the reaction. Enzyme Kinetics.

Sn1 reaction of 2-bromo-2-methylpropane and water

SN1 reaction of 2-bromo-2-methylpropane and water

Image by Mark Xavier Bailon.

SN1 reaction characteristics

Just like in SN2, the same sets of variables affect Affect The feeling-tone accompaniment of an idea or mental representation. It is the most direct psychic derivative of instinct and the psychic representative of the various bodily changes by means of which instincts manifest themselves. Psychiatric Assessment how the reactions proceed. For the substrate Substrate A substance upon which the enzyme acts. Basics of Enzymes, SN1 reactions are favored as the substrate Substrate A substance upon which the enzyme acts. Basics of Enzymes can form the most stable carbocation. The trend of stability of carbocation is shown below. This means a higher number of alkyl substituents attached to the carbon where the leaving group is attached, the faster the reaction occurs.

For the leaving group, the same trend is observed. The best-leaving groups are the most stable with a negative charge; those are the conjugate bases Bases Usually a hydroxide of lithium, sodium, potassium, rubidium or cesium, but also the carbonates of these metals, ammonia, and the amines. Acid-Base Balance of strong acids Acids Chemical compounds which yield hydrogen ions or protons when dissolved in water, whose hydrogen can be replaced by metals or basic radicals, or which react with bases to form salts and water (neutralization). An extension of the term includes substances dissolved in media other than water. Acid-Base Balance.

An SN1 reaction is not much affected by the nature of the nucleophile. This is because of the inherent mechanism of SN1 to produce a carbocation. Since the carbocation can attract any compound that can donate an electron pair, the nature of the nucleophile will not matter.

Unlike in the SN2 reaction where the solvent affects the reaction by stabilizing or destabilizing the nucleophile, in the SN1 reaction, it affects the reaction by stabilizing or destabilizing the carbocation intermediate. Polar solvents are preferred as they can stabilize the intermediate.

Elimination Reaction

Another important reaction of alkyl halide is the elimination Elimination The initial damage and destruction of tumor cells by innate and adaptive immunity. Completion of the phase means no cancer growth. Cancer Immunotherapy reaction.  Elimination Elimination The initial damage and destruction of tumor cells by innate and adaptive immunity. Completion of the phase means no cancer growth. Cancer Immunotherapy reaction involves the elimination Elimination The initial damage and destruction of tumor cells by innate and adaptive immunity. Completion of the phase means no cancer growth. Cancer Immunotherapy of HX and, in the process, forms multiple bonds. Elimination Elimination The initial damage and destruction of tumor cells by innate and adaptive immunity. Completion of the phase means no cancer growth. Cancer Immunotherapy reactions proceed following Zaitsev’s rule which states that elimination Elimination The initial damage and destruction of tumor cells by innate and adaptive immunity. Completion of the phase means no cancer growth. Cancer Immunotherapy reactions generally give the more stable alkene product Product A molecule created by the enzymatic reaction. Basics of Enzymes. The stability of alkene products here refers to the number of alkyl substituents around the carbon double bond. The more highly substituted alkene product Product A molecule created by the enzymatic reaction. Basics of Enzymes predominates. Just like in nucleophilic substitution, elimination Elimination The initial damage and destruction of tumor cells by innate and adaptive immunity. Completion of the phase means no cancer growth. Cancer Immunotherapy reactions may proceed through different mechanisms: E1 E1 An aromatized C18 steroid with a 3-hydroxyl group and a 17-ketone, a major mammalian estrogen. It is converted from androstenedione directly, or from testosterone via estradiol. In humans, it is produced primarily by the cyclic ovaries, placenta, and the adipose tissue of men and postmenopausal women. Noncontraceptive Estrogen and Progestins, E2, and E1cB.

E2 reactions occur when the haloalkane is reacted with a strong base like OH- or alkoxide ion (RO-). The strong base attracts one of the H atoms attached to the C atom adjacent to the C atom where the halogen group is attached. As the H-C bond is broken in the process, two electrons are transferred to the C-C bond-forming an additional bond, eventually rendering the C atom not available anymore to accommodate the halogen substituent. The X group then leaves the compound.

E2 mechanism

E2 mechanism

Image by Mark Xavier Bailon.

E1 E1 An aromatized C18 steroid with a 3-hydroxyl group and a 17-ketone, a major mammalian estrogen. It is converted from androstenedione directly, or from testosterone via estradiol. In humans, it is produced primarily by the cyclic ovaries, placenta, and the adipose tissue of men and postmenopausal women. Noncontraceptive Estrogen and Progestins reactions, just like the SN1 reaction, involve the formation of a carbocation intermediate. The reaction proceeds with heating involved. When the carbocation is formed, it is much easier for the nucleophile to attack the H attached to the C adjacent to the C where the halogen is attached. The alkene is then produced in the process.

E1 mechanism

E1 E1 An aromatized C18 steroid with a 3-hydroxyl group and a 17-ketone, a major mammalian estrogen. It is converted from androstenedione directly, or from testosterone via estradiol. In humans, it is produced primarily by the cyclic ovaries, placenta, and the adipose tissue of men and postmenopausal women. Noncontraceptive Estrogen and Progestins mechanism

Image by Mark Xavier Bailon.

E1cB reaction, in contrast to E1 E1 An aromatized C18 steroid with a 3-hydroxyl group and a 17-ketone, a major mammalian estrogen. It is converted from androstenedione directly, or from testosterone via estradiol. In humans, it is produced primarily by the cyclic ovaries, placenta, and the adipose tissue of men and postmenopausal women. Noncontraceptive Estrogen and Progestins where the reaction involves the formation of a carbocation, involves the formation of a carbanion intermediate. This reaction is common in substrates containing a poor leaving group. Here, instead of the X atom being removed first, the nucleophile attacks the H atom attached to the C atom adjacent to the C atom where the X atom is attached. When the H atom is removed, a carbanion intermediate is formed and rearrangements in the structure produce the alkene. This reaction usually is involved in biological systems.

E1cb mechanism

E1cB mechanism

Image by Mark Xavier Bailon.

References

  1. McMurry, J. (2008). Organic Chemistry. 7th ed. USA. Brooks/Cole, Thomson Learning Inc.
  2. Carey, F. (2000). Organic Chemistry. 4th ed. USA. McGraw-Hill Companies, Inc.

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